Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs75325816 | chr10:74950538 | A/C | 6.41E-12 | 212 | 16.73 | 11.3 | 5.6 | KM Plot |
| KIRP | rs75327027 | chr9:112114046 | A/G | 0 | 204 | 16.97 | 16.47 | 0.97 | KM Plot |
| KIRP | rs7534185 | chr1:89894416 | C/G | 3.92E-10 | 214 | 6.92 | 16 | 16.5 | KM Plot |
| KIRP | rs75396397 | chr9:112110943 | C/T | 0 | 203 | 16.73 | 15.9 | 0.97 | KM Plot |
| KIRP | rs75423426 | chr10:63491927 | T/G | 0 | 213 | 18.25 | 6.83 | 3.38 | KM Plot |
| KIRP | rs7543564 | chr1:212709301 | C/T | 3.04E-7 | 214 | 16.45 | 14.92 | 10.63 | KM Plot |
| KIRP | rs7545608 | chr1:95263197 | G/C | 0.000333 | 210 | 13.17 | 14.83 | 17.27 | KM Plot |
| KIRP | rs7545641 | chr1:89894376 | A/G | 0.000128 | 212 | 8.28 | 13.97 | 16.53 | KM Plot |
| KIRP | rs75479466 | chr11:34961066 | G/A | 4.15E-12 | 212 | 16.43 | 16.72 | 5.57 | KM Plot |
| KIRP | rs75528314 | chr19:42563142 | T/C | 0.000286 | 212 | 16.98 | 14.53 | 11.2 | KM Plot |
| KIRP | rs75537818 | chr17:80698587 | G/A | 3.04E-5 | 212 | 15.88 | 16.13 | 15.15 | KM Plot |
| KIRP | rs75548978 | chr11:34794998 | A/G | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
| KIRP | rs75570878 | chr11:34822410 | A/C | 0 | 213 | 15.2 | 17 | 3.83 | KM Plot |
| KIRP | rs75598737 | chr17:80721126 | A/C | 8.85E-5 | 209 | 15.88 | 18 | 15.15 | KM Plot |
| KIRP | rs75602454 | chr16:20453711 | C/T | 0.000565 | 209 | 16.43 | 13.35 | 5.88 | KM Plot |